Pharma / structural biology
Protein crystallization for drug formulation
Many drugs are proteins, such as monoclonal antibodies, and today these are usually given by intravenous infusion in hospital. A concentrated, less viscous crystalline suspension could instead be given as an injection under the skin, and better crystals give sharper X-ray structures for drug design. On Earth, sedimentation and convection disturb crystal growth. In microgravity both are reduced, which can give more uniform crystals: on the ISS, Merck got a more uniform, less viscous pembrolizumab suspension, and JAXA got higher-resolution crystals for some proteins.
Who it is for
- Biologics formulation teams developing high-concentration antibody suspensions for injection under the skin
- Structural biology and drug-discovery labs that need higher-resolution crystal structures of target proteins
- Contract research organizations that offer crystallization screening
- Academic crystallography groups testing how convection affects crystal quality
- Small-molecule polymorph screening, but only for solution processes that work between 4 and 45 C
What earlier flights found
| Year | Mission | What flew | What it found |
|---|---|---|---|
| 2017 (flight, 19 Feb to 19 Mar); results published 2019 | Merck pembrolizumab crystallization (CASIS PCG-5) on SpaceX CRS-10, ISS National LabISS (delivered and returned by SpaceX Dragon) | Batch crystallization of pembrolizumab (Keytruda), 20-40 mg/ml, in 1 ml polysulfone bottles in the Handheld Protein Crystallization Facility. Held at +4 C for 24 h in the MERLIN incubator, then ramped to +30 C. Stayed in MERLIN for 18 days. A ground control with the same protein and reagents ran in parallel on the same temperature schedule. | Flight suspensions had a single particle size peak at about 39 um. Ground controls had two peaks, at about 13 and 102 um. The flight suspension was less viscous (3.67 vs 5.48 cP at 50 mg/ml). It sedimented in about 57 min, while the ground sample had not fully sedimented after several hours. Dissolved flight crystals kept over 94% binding activity relative to reference pembrolizumab.12 |
| 2002 to 2012 (14 sessions by 2012) | JAXA PCG (high-quality protein crystal growth project)ISS (since 2008 in the Protein Crystallization Research Facility on the Kibo module, 293 K / 20 C); samples carried up and down on Progress and Soyuz | Counter-diffusion crystallization: protein in capillaries plugged with agarose gel, inside tubes of crystallization solution in the JAXA Crystallization Box (up to 144 conditions in about 1 litre). 580 proteins crystallized in total. Growth times were six weeks to four months. | Some space-grown crystals diffracted to higher resolution, for example 1.06 A vs 1.30 A for lipocalin-type prostaglandin D synthase. Success needed a highly homogeneous protein sample and a viscous (PEG) solution. In flights 1 to 5, 40 of 215 samples (19%) gave good results. Return transport was thermally passive. The temperature inside Soyuz sometimes rose above 303 K (30 C), which degraded space-grown crystals, so JAXA added heptadecane phase-change packs (melting at 295 K) and vacuum insulation.3 |
| 2023-2024 (launched 12 June 2023, crystallization started 29 June 2023, landed 21 Feb 2024) | Varda Space Industries W-1Free-flyer with a recoverable capsule; landed at the Utah Test and Training Range | In-orbit crystallization of ritonavir, a small-molecule HIV drug and not a protein, from a melt (131 C for 36 min, then 80 C growth for nearly 24 h, then cooled to 15 C). Passive controls of ritonavir Forms I, II, III and amorphous were thermally isolated from the crystallization hardware. | The returned flight samples were consistent with the metastable Form III of ritonavir. Test samples and passive controls showed excellent stability after return. The results are a ChemRxiv preprint and have not been peer reviewed.456 |
How LELP-1 runs it
Sample. A purified, highly homogeneous target protein (for example a monoclonal antibody at 20-40 mg/ml, or a protein for X-ray structure work) with a viscous precipitant such as PEG. The conditions are fixed in ground tests before flight. Container. Large-bay 24-well cassette. 16 sealed batch wells (about 0.5-1 ml each), with protein and precipitant kept in separate reservoirs until the fluidics mix them in orbit. 8 positions hold gel-plugged counter-diffusion capillaries (JAXA style), with the precipitant added by the fluidics at activation. Launch. Live protein solution and precipitant in separate reservoirs, held at 4 C. No crystallization before activation. Not cryopreserved, because freezing would ruin the experiment. Light and gas. No light needed except for brief microscope imaging. No gas exchange: sealed wells, no CO2 or O2 supply.
- day -1
Late load of the filled cassette at 4 C into the powered bay on the pad. A matching ground-control cassette from the same protein lot is loaded at the same time.
- day 0
Launch. Bay holds 4 C. Accelerometer and dosimeter logging start.
- day 1
Arm parked and quiet microgravity confirmed (about 1e-6 g). Baseline brightfield images of all wells. Fluidics mix protein and precipitant in the batch wells and fill the counter-diffusion reservoirs (activation).
- day 1
Temperature step or ramp to the customer's growth setpoint. Default is 20 C, as in JAXA's PCRF. A warming ramp like Merck's (4 C to 30 C) is also possible, with the ramp rate set by the customer.
- day 2
Automated brightfield imaging of chosen wells every 6 h to record nucleation time, crystal count and size. Optional fluorescence if the customer adds a trace-labelled protein.
- day 5
Mid-point check of images on the ground. The customer may change the temperature profile of later wells with a signed command.
- day 9
Last full imaging pass. Bay set to the customer's return hold temperature. No fixative is added, because crystals stay in their mother liquor.
- day 10
End of lab operations. Deorbit, reentry and splashdown with the bay still under thermal control. Cassette handed to the courier about 20 min after splashdown in an active thermal shipper at the same setpoint.
The payload module, in CAD
Every item in the module sheet, drawn and packed into the large bay deck by deck. The back face mates with the bay: blind-mate connector, and a cold wall against the bay's thermoelectric block. The front face carries Dexter-L's grapple fixture, and the fluid lines run down a channel just behind it. What you load before launch is marked blue in the configurator's payload guide.
CAD generated by cad/build_modules.py (CadQuery, OpenCascade kernel) from the catalog's module items: concept geometry, not a released design. Standard parts keep their real formats; the rest are sized from their catalog mass. The front panel and grapple fixture are left off in the 3-D view and are in the STEP.
Checks
| Fits the large bay | FITS | 313 x 191 x 365 mm envelope; 135 mm of height to spare |
| Mass | AS CATALOG | 5.40 kg in the parts, 5.40 kg in the catalog |
| Parts' boxes | 36 % of the 21.1 L inside | |
| Housing | THIN | 0.60 kg of structure and containment: a 0.30 mm aluminium skin |
| Centre of mass | +1 mm across and -20 mm front to back (+ is toward the front) from the middle, 100 mm up | |
| Lines | 3 fluid lines and 3 harness runs, routed in the channel behind the front panel |
Inside, top to bottom
- Experiment deck imaging stack: inverted microscope, XY stage, sample; 2 micro-pumps, 4 valves on a manifold; sensor pack
- Floor deck fluid pack; controller and data storage; counter-diffusion capillary rack
- The XY stage travels 96.5 x 57.9 mm, so every one of the 24 wells reaches the objective; with the stage the imaging stack is 232 x 151 mm, which sets the module's depth budget.
- Reagent volumes the catalog does not state are split evenly from 75 % of the reservoir item's mass.
- Fluid pack: 2 reagent bags in 1 layer (189 x 139 x 23 mm), every port on a front edge.
- The catalog gives 0.60 kg for structure and containment; as an aluminium box that is a 0.30 mm skin on 0.18 kg of posts and shelves. Thin: the bay rails have to carry the launch loads, or the module needs more structure mass.
- The grapple fixture stands 26 mm proud of the front panel, into the bay opening; everything else is inside the bay envelope.
Components (6) and how each catalog item was drawn
| Component | Deck | kg | Box mm |
|---|---|---|---|
| fluid pack | Floor deck | 0.60 | 189 x 147 x 22 |
| controller and data storage | Floor deck | 0.18 | 94 x 70 x 28 |
| counter-diffusion capillary rack | Floor deck | 0.30 | 90 x 30 x 13 |
| imaging stack: inverted microscope, XY stage, sample | Experiment deck | 2.60 | 232 x 151 x 185 |
| 2 micro-pumps, 4 valves on a manifold | Experiment deck | 0.49 | 50 x 94 x 38 |
| sensor pack | Experiment deck | 0.06 | 56 x 40 x 28 |
| Catalog item | kg | Drawn as |
|---|---|---|
| 24-well crystallization cassette, filled (16 batch wells plus 8 counter-diffusion capillary positions) | 0.80 | cassette |
| Counter-diffusion capillary rack with gel plugs | 0.30 | capillary rack |
| Fluidics: protein and precipitant reservoirs, micro-pumps, valves and manifold | 1.10 | bags, pumps |
| LumaScope-class inverted microscope with XY stage (brightfield plus 2 fluorescence channels) | 1.80 | microscope |
| Thermal interface plate and insulation to the bay thermoelectric block | 0.50 | thermal |
| Primary containment housing and seals | 0.60 | shell |
| Module controller, sensors and harness | 0.30 | avionics, harness, sensors |
Every part with mass (77)
| Part | Role | kg | Size mm |
|---|---|---|---|
| protein (227 mL) | fluid | 0.278 | 93 x 139 x 22 |
| protein port | fluid | 0.024 | 5 x 8 x 5 |
| precipitant (227 mL) | fluid | 0.278 | 93 x 139 x 22 |
| precipitant port | fluid | 0.024 | 5 x 8 x 5 |
| controller enclosure (boards, data storage) | electronics | 0.162 | 94 x 62 x 28 |
| connector 1 | electronics | 0.009 | 12 x 8 x 12 |
| connector 2 | electronics | 0.009 | 12 x 8 x 12 |
| capillary rack with gel plugs | sample | 0.210 | 90 x 30 x 10 |
| capillary 1 | sample | 0.011 | 80 x 3 x 3 |
| capillary 2 | sample | 0.011 | 80 x 3 x 3 |
| capillary 3 | sample | 0.011 | 80 x 3 x 3 |
| capillary 4 | sample | 0.011 | 80 x 3 x 3 |
| capillary 5 | sample | 0.011 | 80 x 3 x 3 |
| capillary 6 | sample | 0.011 | 80 x 3 x 3 |
| capillary 7 | sample | 0.011 | 80 x 3 x 3 |
| capillary 8 | sample | 0.011 | 80 x 3 x 3 |
| microscope base: optics, filter cubes, camera | imaging | 0.931 | 170 x 120 x 70 |
| objective | imaging | 0.059 | 22 x 22 x 16 |
| XY stage frame (travel 96.5 x 57.9 mm: every well over the objective) | imaging | 0.243 | 232 x 151 x 8 |
| stage carriage | imaging | 0.108 | 140 x 98 x 5 |
| X stepper | imaging | 0.095 | 28 x 20 x 20 |
| Y stepper | imaging | 0.095 | 20 x 16 x 20 |
| illumination column | imaging | 0.081 | 16 x 16 x 95 |
| illumination arm | imaging | 0.054 | 112 x 16 x 12 |
| LED head, transmitted light | imaging | 0.135 | 28 x 28 x 22 |
| cassette, 24 wells (SBS footprint, 19.3 mm pitch) | sample | 0.656 | 128 x 86 x 45 |
| culture in the wells | sample | 0.024 | 112 x 73 x 8 |
| cassette lid, sealed and gas-permeable | sample | 0.096 | 128 x 86 x 2 |
| cassette fluid port 1 | sample | 0.012 | 6 x 7 x 6 |
| cassette fluid port 2 | sample | 0.012 | 6 x 7 x 6 |
| fluid manifold | pump | 0.148 | 50 x 94 x 12 |
| micro-pump 1 | pump | 0.124 | 20 x 20 x 26 |
| micro-pump 2 | pump | 0.124 | 20 x 20 x 26 |
| valve 1 | pump | 0.025 | 9 x 9 x 16 |
| valve 2 | pump | 0.025 | 9 x 9 x 16 |
| valve 3 | pump | 0.025 | 9 x 9 x 16 |
| valve 4 | pump | 0.025 | 9 x 9 x 16 |
| sensor pack | sensor | 0.054 | 56 x 40 x 22 |
| sensor pack: head 1 | sensor | 0.003 | 8 x 8 x 6 |
| sensor pack: head 2 | sensor | 0.003 | 8 x 8 x 6 |
| bottom panel | housing | 0.048 | 313 x 191 x 2 |
| top panel | housing | 0.048 | 313 x 191 x 2 |
| side panel L | housing | 0.057 | 2 x 191 x 362 |
| side panel R | housing | 0.057 | 2 x 191 x 362 |
| back panel (bay interface) | housing | 0.092 | 310 x 2 x 362 |
| front panel | housing | 0.092 | 310 x 2 x 362 |
| corner post 1 | housing | 0.016 | 8 x 8 x 362 |
| corner post 2 | housing | 0.016 | 8 x 8 x 362 |
| corner post 3 | housing | 0.016 | 8 x 8 x 362 |
| corner post 4 | housing | 0.016 | 8 x 8 x 362 |
| shelf 1 | housing | 0.117 | 310 x 158 x 2 |
| cold wall (to the bay's thermoelectric block) | thermal | 0.300 | 290 x 4 x 352 |
| thermoelectric tile 1 | thermal | 0.031 | 30 x 3 x 30 |
| thermoelectric tile 2 | thermal | 0.031 | 30 x 3 x 30 |
| thermoelectric tile 3 | thermal | 0.031 | 30 x 3 x 30 |
| thermoelectric tile 4 | thermal | 0.031 | 30 x 3 x 30 |
| heat spreader | thermal | 0.075 | 160 x 3 x 100 |
| blind-mate connector: power, data, video | interface | 0.013 | 50 x 10 x 22 |
| grapple fixture base (Dexter-L) | interface | 0.013 | 70 x 4 x 70 |
| harness: controller and data storage to imaging stack: inverted microscope run 1 | harness | 0.000 | 5 x 6 x 5 |
| harness: controller and data storage to imaging stack: inverted microscope run 2 | harness | 0.001 | 5 x 21 x 5 |
| harness: controller and data storage to imaging stack: inverted microscope run 3 | harness | 0.002 | 5 x 5 x 62 |
| harness: controller and data storage to imaging stack: inverted microscope run 4 | harness | 0.006 | 168 x 5 x 5 |
| harness: controller and data storage to imaging stack: inverted microscope run 5 | harness | 0.001 | 5 x 38 x 5 |
| harness: controller and data storage to imaging stack: inverted microscope run 6 | harness | 0.000 | 5 x 6 x 5 |
| harness: controller and data storage to 2 micro-pumps run 1 | harness | 0.000 | 5 x 6 x 5 |
| harness: controller and data storage to 2 micro-pumps run 2 | harness | 0.001 | 5 x 21 x 5 |
| harness: controller and data storage to 2 micro-pumps run 3 | harness | 0.008 | 5 x 5 x 215 |
| harness: controller and data storage to 2 micro-pumps run 4 | harness | 0.003 | 73 x 5 x 5 |
| harness: controller and data storage to 2 micro-pumps run 5 | harness | 0.005 | 5 x 130 x 5 |
| harness: controller and data storage to 2 micro-pumps run 6 | harness | 0.006 | 5 x 5 x 177 |
| harness: controller and data storage to 2 micro-pumps run 7 | harness | 0.000 | 5 x 5 x 6 |
| harness: controller to the connector run 1 | harness | 0.000 | 5 x 5 x 6 |
| harness: controller to the connector run 2 | harness | 0.004 | 5 x 112 x 5 |
| harness: controller to the connector run 3 | harness | 0.009 | 243 x 5 x 5 |
| harness: controller to the connector run 4 | harness | 0.012 | 5 x 5 x 317 |
| harness: controller to the connector run 5 | harness | 0.000 | 5 x 8 x 5 |
Measured in orbit
- Nucleation time and crystal count per well Time-lapse brightfield imaging with the bay's LumaScope-class microscope
- Crystal size and growth rate (crystals larger than about 10 um, our estimate) Image analysis of the time-lapse brightfield frames. Smaller particles are not resolved reliably.
- Growth front position in counter-diffusion capillaries Brightfield imaging along the capillary
- Optional protein distribution inside crystals Fluorescence channel, if the customer adds a trace-labelled protein
- Thermal history Bay temperature sensors, logged against the setpoint
- Microgravity quality and disturbances Bay accelerometer, time-stamped against arm motion and thruster events
- Radiation dose Active silicon dosimeter plus passive TLDs
- Seal integrity Bay pressure and humidity sensors
Measured after the return
- Particle size distribution of crystalline suspensions Laser diffraction particle sizing, as Merck used
- Suspension viscosity and sedimentation Viscometry and timed sedimentation, compared with the ground control
- Crystallinity and protein aggregation SONICC (second-harmonic and UV fluorescence) crystal imaging, and dynamic light scattering of the redissolved protein
- Bioactivity of dissolved crystals Assay chosen by the customer, for example an ELISA binding assay as Merck used
- Diffraction resolution and mosaicity X-ray diffraction at a synchrotron beamline, flight vs ground crystals of the same lot
- Polymorph form (small molecules only) X-ray powder diffraction and thermal analysis
Ground control
A matching cassette from the same protein lot and solutions, loaded at the same time, runs in a flight-equivalent bay on the ground. Telemetry drives its temperature to replay the flight log, including launch, activation, ramp and return-hold phases. It is activated at the same time by the same type of fluidics. Ideally a launch-vibration profile is applied before activation. Ground and flight samples go to the same lab and are analysed blind with the same methods. A third passive set, never activated, can show what launch and return alone do to the solutions.
Coming home
Hold the cassette at the customer's growth or hold temperature (default 20 C, within about +/-2 C) from end of growth to the lab. Do not warm, cool or freeze it unless ground tests show that is safe for that protein. How crystals react to temperature depends on the protein: pembrolizumab crystallized on warming from 4 to 30 C, while JAXA saw space-grown crystals degrade when Soyuz rose above 30 C on return. Handle gently, because crystals sit in liquid and can break under shock. The 72 h limit is our estimate (about 20 min to courier handover plus 1-2 days to the lab) and must be confirmed in ground tests for each protein.
Limits of this flight
- Lab operations last at most 14 days. Merck's samples spent 18 days in the incubator and JAXA growth took six weeks to four months, so LELP-1 suits only fast-growing systems whose conditions are fixed on the ground beforehand.
- There is no crew to harvest, mount or flash-cool crystals in orbit. Crystals come back in their mother liquor and can be damaged by reentry and splashdown shocks or by temperature excursions.
- There is no X-ray diffraction in flight. Crystal quality is known only after return.
- The bay microscope cannot reliably resolve particles of a few microns, so the in-flight size data are qualitative. The full particle size distribution needs ground instruments.
- Microgravity helps only some proteins. In JAXA's flights 1 to 5, 40 of 215 samples (19%) gave good results, and success needed highly homogeneous samples in viscous solutions.
- Sample volumes are millilitres per well. This is a research and formulation-development service, not drug manufacturing.
- The bay range is 4 to 45 C. Melt-based small-molecule processes such as Varda's W-1 ritonavir run (131 C melt, 80 C growth) are out of scope.
- Arm motion and any thruster use raise the g-level. Growth wells need quiet periods, and the timeline must be shared with other bays.
- LELP-1 is a design in a digital twin. None of this has flown, and all LELP-1 numbers are our estimates.
A satellite of its own: SP-XTL B · samples return, hardware burns up
SP-XTL is a 116 kg free-flyer. Only the samples come home: 2.2 kg ride in a 45 kg capsule in a drawer behind an optical window; the microscope looks through the window from the service module, and fluid lines cross through dry-break couplings that part at separation once the last fluid step is done. The microscope, pumps and reservoirs stay in the service module and burn up with it. Why B: crystals return in their mother liquor at the growth temperature, held within about 2 C by heating and cooling (JAXA added 22 C phase-change packs after warm returns).
Comes home · capsule
| crystallisation cassette | 0.80 |
| counter-diffusion capillary rack | 0.30 |
| sample drawer, optical window, dry-break couplings | 0.50 |
| drawer thermoelectric block | 0.60 |
| Capsule at entry (with heat shield, parachute, hold battery, margin) | 45.0 |
Stays · service module
| experiment instruments, pumps and reservoirs | 4.30 |
| Service module dry, with power, radios, attitude, propulsion | 61.2 |
Budgets · estimate
| Launch mass | 116.2 kg |
| Propellant for 190 m/s | 10.0 kg |
| Average / peak load | 58 / 111 W |
| Array, worst eclipse season | 125 W |
| Battery (sized by ascent) | 241 Wh |
| Deorbit burn | 2 × 22 N, 502 s |
Tailored for this experiment
- Powered thermal control on the launch pad and through ascent to hold 4 C after a late load (about 1 day before launch)
- Continuous, battery-backed thermal control of the bay through deorbit, reentry, splashdown and until courier handover, with no gap in setpoint
- Active thermal shipper for the courier at the customer's hold temperature, with a temperature logger
- Quiet-period scheduling: no robotic arm motion during nucleation and growth (arm motion raises the level to about 1e-4 to 1e-3 g)
- Accelerometer data time-stamped and delivered with the images, so the customer can link disturbances to crystal defects
Bay or satellite?
The capsule is the floor: no capsule much smaller than about 45 kg has been recovered yet, so 2.2 kg of samples need 116 kg of satellite. On LELP-1 the same samples share one capsule, the whole lab, with 31 other bays. A dedicated satellite earns its place when the experiment needs the schedule to itself, a quieter ride (about 7.3 × 10⁻⁸ g quasi-steady, no robotic arm), or power a bay cannot give.
First-order sizing with a 20 % margin by one model for every experiment, reviewed independently; caveats and sources. The smallest recovered capsule so far (Varda W-1) is under 90 kg, so treat these masses as optimistic.
References
- Reichert P, Prosise W, Fischmann TO, et al. (2019). Pembrolizumab microgravity crystallization experimentation. npj Microgravity 5:28. doi:10.1038/s41526-019-0090-3 https://pmc.ncbi.nlm.nih.gov/articles/PMC6889310/
- ISS National Laboratory (2 Dec 2019). Published Results From Crystallization Experiments on the ISS Could Help Merck Improve Cancer Drug Delivery. https://www.issnationallab.org/merck-lab-publishes-pembrolizumab-results/
- Takahashi S, Ohta K, Furubayashi N, et al. (2013). JAXA protein crystallization in space: ongoing improvements for growing high-quality crystals. Journal of Synchrotron Radiation 20(6):968-973. doi:10.1107/S0909049513021596 https://pmc.ncbi.nlm.nih.gov/articles/PMC3795566/
- Bauser HC, Smith PA, Parent SD, et al. (2024). Return of the Ritonavir: A Study on the Stability of Pharmaceuticals Processed in Orbit and Returned to Earth. ChemRxiv preprint. doi:10.26434/chemrxiv-2024-vb20g-v3 https://www.varda.com/science/return-of-the-ritonavir
- Varda Space Industries. W-1 mission page. https://www.varda.com/mission/w-1
- New Space Economy (1 Apr 2024). Return of the Ritonavir: stability of pharmaceuticals processed in orbit (news summary of the Varda / Improved Pharma preprint). https://newspaceeconomy.ca/2024/04/01/return-of-the-ritonavir-stability-of-pharmaceuticals-processed-in-orbit/
Fact-check: 22 claims and sources checked, 14 confirmed, 8 corrected, 0 removed · confidence high